STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
klhdc3Kelch domain containing 3. (382 aa)    
Predicted Functional Partners:
cul2
Cullin 2; Belongs to the cullin family.
    
 
 0.708
LOC111574725
Uncharacterized protein.
      
 0.630
mea1
Male-enhanced antigen 1.
      
 0.597
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
   0.587
ENSAOCP00000023189
Uncharacterized protein.
    
 
 0.584
spata4
Spermatogenesis associated 4.
      
 0.583
LOC111587849
Elongin B.
    
 
 0.569
ELOB
Elongin B.
    
 
 0.569
Sfi1
Uncharacterized protein.
      
 0.565
zmynd10
Zinc finger, MYND-type containing 10.
      
 0.561
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.