Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
asphd2Aspartate beta-hydroxylase domain containing 2. (369 aa)    
Predicted Functional Partners:
sez6l2
Seizure related 6 homolog (mouse)-like 2.
   
  
 0.710
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
      
 0.691
LOC111579251
Potassium channel tetramerization domain containing 13.
      
 0.691
hps4
HPS4 biogenesis of lysosomal organelles complex 3 subunit 2.
      
 0.690
srrd
SRR1 domain containing.
      
 0.689
kif22
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.617
acbd6
Acyl-CoA binding domain containing 6.
      
 0.616
LOC111582744
Uncharacterized protein.
      
 0.615
tmem53
Transmembrane protein 53.
      
 0.615
LOC111565348
Protein yippee-like; Belongs to the yippee family.
      
 0.614
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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