Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111585010Uncharacterized protein. (314 aa)    
Predicted Functional Partners:
ENSAOCP00000005302
DUF3694 domain-containing protein.
 
      0.884
LOC111562517
Uncharacterized protein.
    
 
 0.623
pxdc1
PX domain containing 1b.
    
   0.518
LOC111563004
Uncharacterized protein.
   
 
  0.496
LOC111576629
Uncharacterized protein.
   
 
  0.496
LOC111582463
RAB guanine nucleotide exchange factor (GEF) 1, like.
   
 
  0.496
LOC111565032
RAB6B, member RAS oncogene family a.
    
 0.469
LOC111578795
RAB6B, member RAS oncogene family.
    
 0.469
RAB41
RAB41, member RAS oncogene family.
    
 0.469
LOC111579855
Uncharacterized protein.
    
 0.469
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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