Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ciitaNACHT domain-containing protein. (756 aa)    
Predicted Functional Partners:
rfx5
Regulatory factor X, 5.
    
 
 0.989
rfxank
Regulatory factor X-associated ankyrin-containing protein.
   
 0.947
LOC111579033
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
   
   0.796
PSMC5
26S proteasome regulatory subunit 8.
   
   0.796
rfxap
Regulatory factor X-associated protein.
      
 0.789
LOC111569482
CD4-1 molecule.
   
 
 0.720
ENSAOCP00000015375
Ig-like domain-containing protein.
   
 
 0.659
LOC111563483
Ig-like domain-containing protein.
   
 
 0.659
rrp9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
      
 0.615
lhpp
Phospholysine phosphohistidine inorganic pyrophosphate phosphatase.
      
 0.614
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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