Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111574320Uncharacterized protein. (402 aa)    
Predicted Functional Partners:
nphp3
Nephronophthisis 3.
    
 0.805
arl3
ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.
   
 0.679
LOC111567308
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.679
LOC111588582
NME/NM23 family member 8; Belongs to the NDK family.
   
 
 0.583
rp2
Protein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization.
     
  0.555
unc119
Unc-119 lipid binding chaperone.
   
   0.539
LOC111580864
GMP_PDE_delta domain-containing protein.
   
   0.539
ENSAOCP00000000845
WD_REPEATS_REGION domain-containing protein.
   
 0.536
ENSAOCP00000030355
Uncharacterized protein.
   
 0.536
ak9
Adenylate kinase 9.
    
 
 0.535
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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