STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dlec1DLEC1 cilia and flagella associated protein. (1427 aa)    
Predicted Functional Partners:
LOC111580783
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
   0.763
LOC111580642
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
   0.763
rsph14
Uncharacterized protein.
    
 
 0.753
lrrc23
Leucine rich repeat containing 23.
   
 0.748
cfap161
Cilia and flagella associated protein 161.
   
 0.732
lrrc34
Leucine rich repeat containing 34.
    
 0.718
ccdc146
Uncharacterized protein.
    
 0.714
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.708
spata18
Spermatogenesis associated 18.
      
 0.698
spata17
Spermatogenesis associated 17.
   
 
 0.690
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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