Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111571347MAM domain-containing protein. (391 aa)    
Predicted Functional Partners:
npnt
Nephronectin a.
     
 
0.900
frem1
Fras1 related extracellular matrix 1a.
     
  0.800
LOC111563667
FRAS1 related extracellular matrix 2b.
     
  0.800
frem2
FRAS1 related extracellular matrix 2a.
     
  0.800
LOC111563174
Fras1 related extracellular matrix 1b.
     
  0.800
LOC111567785
Integrin beta; Belongs to the integrin beta chain family.
     
  0.650
itga8
Integrin, alpha 8; Belongs to the integrin alpha chain family.
     
  0.650
LOC111563530
Integrin beta; Belongs to the integrin beta chain family.
     
  0.650
LOC111588455
Uncharacterized protein.
    
 0.403
ENSAOCP00000028109
Uncharacterized protein.
    
 0.403
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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