STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111567846Paired box 2b. (387 aa)    
Predicted Functional Partners:
gsc
Goosecoid.
    
 
 0.585
LOC111567625
Uncharacterized protein.
   
 
 0.556
LOC111578015
Ets variant 2.
   
 
 0.556
ets1
V-ets avian erythroblastosis virus E26 oncogene homolog 1.
   
 
 0.556
cbfb
Core-binding factor subunit beta.
     
 0.512
LOC111562778
Runt-related transcription factor.
    
 0.484
runx2
Runt-related transcription factor.
    
 0.478
LOC111578471
Runt-related transcription factor.
    
 0.478
ENSAOCP00000008932
Runt domain-containing protein.
    
 0.470
e2f1
E2F transcription factor 1.
    
 
 0.410
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.