Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111585005Si:ch73-196l6.5. (421 aa)    
Predicted Functional Partners:
slc52a3
Solute carrier family 52 member 3.
  
  
 
0.903
LOC111564770
Zgc:91890.
  
  
 
0.901
stox1
Storkhead box 1.
      
 0.546
adgrv1
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
      
 0.515
srrm4
Serine/arginine repetitive matrix 4.
      
 0.481
LOC111569155
RPGRIP1 like.
      
 0.440
rfk
Riboflavin kinase.
      
 0.420
ENSAOCP00000000545
Uncharacterized protein.
      
 0.413
flad1
FAD synthase; Catalyzes the adenylation of flavin mononucleotide (FMN) to form flavin adenine dinucleotide (FAD) coenzyme. In the C-terminal section; belongs to the PAPS reductase family. FAD1 subfamily.
      
 0.413
LOC111567096
Wolfram syndrome 1a (wolframin).
      
 0.413
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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