Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ppoxProtoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (476 aa)    
Predicted Functional Partners:
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
 0.999
cpox
Coproporphyrinogen oxidase.
  
 
 0.998
urod
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 
 0.997
ENDOV
Endonuclease V.
  
 
 0.916
hmbs
Hydroxymethylbilane synthase a.
  
  
 0.873
uros
Uroporphyrinogen III synthase.
  
  
 0.846
alad
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
  
  
 0.841
gale
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
 0.816
abcb6
ATP-binding cassette, sub-family B (MDR/TAP), member 6a.
      
 0.756
Fh
Fumarate hydratase.
     
  0.732
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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