Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
trmt10atRNA methyltransferase 10A. (310 aa)    
Predicted Functional Partners:
mrps31
Mitochondrial ribosomal protein S31.
   
 
 0.848
mrps15
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
   0.826
mrps25
Mitochondrial ribosomal protein S25.
    
 
 0.824
mrps27
Mitochondrial ribosomal protein S27.
   
 
 0.823
mettl1
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
 
 0.817
ENSAOCP00000005734
Mitochondrial ribosomal protein S5.
   
 
 0.815
mrps18b
Mitochondrial ribosomal protein S18B.
   
   0.809
mrps28
Mitochondrial ribosomal protein S28.
   
 
 0.803
mrps23
Mitochondrial ribosomal protein S23.
   
   0.793
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
   
   0.792
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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