Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111562996Zinc finger protein 687a. (1224 aa)    
Predicted Functional Partners:
ints1
Integrator complex subunit 1.
   
   0.758
ints3
Integrator complex subunit 3.
   
   0.758
ints5
Integrator complex subunit 5.
   
   0.757
LOC111574179
Protein kinase C binding protein 1, like.
   
 
 0.741
LOC111579937
Zinc finger, MYND-type containing 8.
   
 
 0.741
LOC111588364
Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.722
znf592
Uncharacterized protein.
   
 
 0.674
UBE2O
Ubiquitin conjugating enzyme E2 O.
   
  0.663
nsd3
Nuclear receptor binding SET domain protein 3.
   
 0.494
taf13
TATA-box binding protein associated factor 13.
     
 0.454
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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