phox2b protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GPR68	phox2b	ENSAOCP00000005887	ENSAOCP00000005447	G protein-coupled receptor 68; Belongs to the G-protein coupled receptor 1 family.	Paired like homeobox 2Bb.	0.614
LOC111568226	LOC111586653	ENSAOCP00000008870	ENSAOCP00000030612	Monooxygenase, DBH-like 1, like.	Tyrosine hydroxylase 2.	0.525
LOC111568226	phox2a	ENSAOCP00000008870	ENSAOCP00000011734	Monooxygenase, DBH-like 1, like.	Paired like homeobox 2A.	0.529
LOC111568226	phox2b	ENSAOCP00000008870	ENSAOCP00000005447	Monooxygenase, DBH-like 1, like.	Paired like homeobox 2Bb.	0.578
LOC111568226	th	ENSAOCP00000008870	ENSAOCP00000003395	Monooxygenase, DBH-like 1, like.	Tyrosine hydroxylase.	0.595
LOC111586653	LOC111568226	ENSAOCP00000030612	ENSAOCP00000008870	Tyrosine hydroxylase 2.	Monooxygenase, DBH-like 1, like.	0.525
LOC111586653	phox2a	ENSAOCP00000030612	ENSAOCP00000011734	Tyrosine hydroxylase 2.	Paired like homeobox 2A.	0.409
LOC111586653	phox2b	ENSAOCP00000030612	ENSAOCP00000005447	Tyrosine hydroxylase 2.	Paired like homeobox 2Bb.	0.701
LOC111586653	th	ENSAOCP00000030612	ENSAOCP00000003395	Tyrosine hydroxylase 2.	Tyrosine hydroxylase.	0.901
LOC111588455	phox2a	ENSAOCP00000013741	ENSAOCP00000011734	Uncharacterized protein.	Paired like homeobox 2A.	0.424
LOC111588455	phox2b	ENSAOCP00000013741	ENSAOCP00000005447	Uncharacterized protein.	Paired like homeobox 2Bb.	0.617
LOC111588455	ret	ENSAOCP00000013741	ENSAOCP00000020617	Uncharacterized protein.	Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.	0.616
gpr4	phox2b	ENSAOCP00000021418	ENSAOCP00000005447	G protein-coupled receptor 4; Belongs to the G-protein coupled receptor 1 family.	Paired like homeobox 2Bb.	0.614
hand2	phox2a	ENSAOCP00000024836	ENSAOCP00000011734	Heart and neural crest derivatives expressed 2.	Paired like homeobox 2A.	0.611
hand2	phox2b	ENSAOCP00000024836	ENSAOCP00000005447	Heart and neural crest derivatives expressed 2.	Paired like homeobox 2Bb.	0.723
hand2	sox10	ENSAOCP00000024836	ENSAOCP00000000344	Heart and neural crest derivatives expressed 2.	SRY-box transcription factor 10.	0.409
phox2a	LOC111568226	ENSAOCP00000011734	ENSAOCP00000008870	Paired like homeobox 2A.	Monooxygenase, DBH-like 1, like.	0.529
phox2a	LOC111586653	ENSAOCP00000011734	ENSAOCP00000030612	Paired like homeobox 2A.	Tyrosine hydroxylase 2.	0.409
phox2a	LOC111588455	ENSAOCP00000011734	ENSAOCP00000013741	Paired like homeobox 2A.	Uncharacterized protein.	0.424
phox2a	hand2	ENSAOCP00000011734	ENSAOCP00000024836	Paired like homeobox 2A.	Heart and neural crest derivatives expressed 2.	0.611