STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctnna1Catenin (cadherin-associated protein), alpha 1. (907 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.983
LOC111573771
Uncharacterized protein.
   
 0.973
vcl
Vinculin b.
    
0.959
LOC111581406
Vinculin a.
    
0.959
afdn
Afadin, adherens junction formation factor a.
    
 0.939
LOC111585137
Uncharacterized protein.
    
 0.929
LOC111582786
Uncharacterized protein.
   
 0.927
actn1
Actinin, alpha 1.
   
 0.927
LOC111577702
Tight junction protein 1b; Belongs to the MAGUK family.
   
 0.920
LOC111576604
Catenin alpha 2.
  
  
 
0.901
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.