Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nsg2Neuronal vesicle trafficking associated 2. (180 aa)    
Predicted Functional Partners:
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
      
 0.705
rtraf
RNA transcription, translation and transport factor.
      
 0.649
tmem192
Transmembrane protein 192.
      
 0.617
TMEM19
Transmembrane protein 19.
      
 0.607
scg3
Secretogranin III.
   
  
 0.531
LOC111575124
Angiomotin.
      
 0.530
LOC111571132
Copine VII.
   
  
 0.518
wdr91
WD repeat domain 91.
      
 0.504
tcf20
Transcription factor 20.
      
 0.481
LOC111583025
Uncharacterized protein.
      
 0.480
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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