STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbx1T-box transcription factor 1. (518 aa)    
Predicted Functional Partners:
rchy1
Uncharacterized protein.
   
    0.557
prickle1
Prickle homolog 1b.
      
 0.553
prickle2
Prickle homolog 2b.
      
 0.552
LOC111576826
Prickle homolog 2a.
      
 0.552
PRICKLE1
Prickle homolog 1a.
      
 0.538
VANGL1
Vang-like protein.
      
 0.495
gnb1l
Guanine nucleotide binding protein (G protein), beta polypeptide 1-like.
      
 0.465
LOC111580091
H6 family homeobox 3a.
    
 
 0.429
LOC111582239
H6 family homeobox 3.
    
 
 0.429
LOC111576734
H6 family homeobox 4.
    
 
 0.429
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.