Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AXIN2 | nr2f2 | ENSAOCP00000018219 | ENSAOCP00000005584 | Axin 2. | Nuclear receptor subfamily 2, group F, member 2. | 0.436 |
| LOC111566522 | nr2f2 | ENSAOCP00000008123 | ENSAOCP00000005584 | Axin 2 (conductin, axil). | Nuclear receptor subfamily 2, group F, member 2. | 0.436 |
| LOC111587464 | lyve1 | ENSAOCP00000008164 | ENSAOCP00000010006 | Uncharacterized protein. | Lymphatic vessel endothelial hyaluronic receptor 1a. | 0.475 |
| LOC111587464 | nr2f2 | ENSAOCP00000008164 | ENSAOCP00000005584 | Uncharacterized protein. | Nuclear receptor subfamily 2, group F, member 2. | 0.525 |
| SOX18 | lyve1 | ENSAOCP00000000777 | ENSAOCP00000010006 | SRY-box transcription factor 18. | Lymphatic vessel endothelial hyaluronic receptor 1a. | 0.475 |
| SOX18 | nr2f2 | ENSAOCP00000000777 | ENSAOCP00000005584 | SRY-box transcription factor 18. | Nuclear receptor subfamily 2, group F, member 2. | 0.525 |
| hey2 | nr2f2 | ENSAOCP00000010295 | ENSAOCP00000005584 | Hes-related family bHLH transcription factor with YRPW motif 2. | Nuclear receptor subfamily 2, group F, member 2. | 0.566 |
| lyve1 | LOC111587464 | ENSAOCP00000010006 | ENSAOCP00000008164 | Lymphatic vessel endothelial hyaluronic receptor 1a. | Uncharacterized protein. | 0.475 |
| lyve1 | SOX18 | ENSAOCP00000010006 | ENSAOCP00000000777 | Lymphatic vessel endothelial hyaluronic receptor 1a. | SRY-box transcription factor 18. | 0.475 |
| lyve1 | nr2f2 | ENSAOCP00000010006 | ENSAOCP00000005584 | Lymphatic vessel endothelial hyaluronic receptor 1a. | Nuclear receptor subfamily 2, group F, member 2. | 0.515 |
| med1 | ncor1 | ENSAOCP00000017723 | ENSAOCP00000010684 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor corepressor 1. | 0.675 |
| med1 | ncor2 | ENSAOCP00000017723 | ENSAOCP00000006616 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor corepressor 2. | 0.675 |
| med1 | nr2f2 | ENSAOCP00000017723 | ENSAOCP00000005584 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor subfamily 2, group F, member 2. | 0.532 |
| med1 | polr2b | ENSAOCP00000017723 | ENSAOCP00000021156 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.955 |
| ncor1 | med1 | ENSAOCP00000010684 | ENSAOCP00000017723 | Nuclear receptor corepressor 1. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.675 |
| ncor1 | nr2f2 | ENSAOCP00000010684 | ENSAOCP00000005584 | Nuclear receptor corepressor 1. | Nuclear receptor subfamily 2, group F, member 2. | 0.537 |
| ncor2 | med1 | ENSAOCP00000006616 | ENSAOCP00000017723 | Nuclear receptor corepressor 2. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.675 |
| ncor2 | nr2f2 | ENSAOCP00000006616 | ENSAOCP00000005584 | Nuclear receptor corepressor 2. | Nuclear receptor subfamily 2, group F, member 2. | 0.537 |
| nr2f2 | AXIN2 | ENSAOCP00000005584 | ENSAOCP00000018219 | Nuclear receptor subfamily 2, group F, member 2. | Axin 2. | 0.436 |
| nr2f2 | LOC111566522 | ENSAOCP00000005584 | ENSAOCP00000008123 | Nuclear receptor subfamily 2, group F, member 2. | Axin 2 (conductin, axil). | 0.436 |
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