Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem134Transmembrane protein 134. (205 aa)    
Predicted Functional Partners:
serf2
4F5 domain-containing protein.
      
 0.785
UBXN4
UBX domain protein 4.
    
   0.772
ENSAOCP00000021008
Uncharacterized protein.
      
 0.705
Mrps2
Mitochondrial ribosomal protein S2.
   
  
 0.689
LOC111583953
Ring finger protein 170.
      
 0.686
ENSAOCP00000009570
Uncharacterized protein.
      
 0.655
ppm1e
Protein phosphatase, Mg2+/Mn2+ dependent, 1E.
      
 0.653
slc8b1
Solute carrier family 8 member B1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      
 0.617
tor2a
Torsin family 2, member A.
      
 0.615
ip6k1
Kinase; Belongs to the inositol phosphokinase (IPK) family.
    
   0.591
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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