dmap1 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000000605	ENSAOCP00000004552	ENSAOCP00000000605	ENSAOCP00000004552	Bromo domain-containing protein.	Uncharacterized protein.	0.955
ENSAOCP00000000605	actl6a	ENSAOCP00000000605	ENSAOCP00000004927	Bromo domain-containing protein.	Actin-like 6A; Belongs to the actin family.	0.894
ENSAOCP00000000605	dmap1	ENSAOCP00000000605	ENSAOCP00000005665	Bromo domain-containing protein.	DNA methyltransferase 1 associated protein 1.	0.986
ENSAOCP00000000605	ing3	ENSAOCP00000000605	ENSAOCP00000024792	Bromo domain-containing protein.	Inhibitor of growth protein.	0.982
ENSAOCP00000000605	meaf6	ENSAOCP00000000605	ENSAOCP00000017035	Bromo domain-containing protein.	MYST/Esa1-associated factor 6.	0.979
ENSAOCP00000000605	mrgbp	ENSAOCP00000000605	ENSAOCP00000002557	Bromo domain-containing protein.	MRG/MORF4L binding protein.	0.983
ENSAOCP00000000605	ruvbl1	ENSAOCP00000000605	ENSAOCP00000022842	Bromo domain-containing protein.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.959
ENSAOCP00000000605	ruvbl2	ENSAOCP00000000605	ENSAOCP00000020747	Bromo domain-containing protein.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.961
ENSAOCP00000000605	vps72	ENSAOCP00000000605	ENSAOCP00000012970	Bromo domain-containing protein.	Vacuolar protein sorting 72 homolog a.	0.965
ENSAOCP00000000605	yeats4	ENSAOCP00000000605	ENSAOCP00000018919	Bromo domain-containing protein.	YEATS domain containing 4.	0.969
ENSAOCP00000004552	ENSAOCP00000000605	ENSAOCP00000004552	ENSAOCP00000000605	Uncharacterized protein.	Bromo domain-containing protein.	0.955
ENSAOCP00000004552	actl6a	ENSAOCP00000004552	ENSAOCP00000004927	Uncharacterized protein.	Actin-like 6A; Belongs to the actin family.	0.894
ENSAOCP00000004552	dmap1	ENSAOCP00000004552	ENSAOCP00000005665	Uncharacterized protein.	DNA methyltransferase 1 associated protein 1.	0.986
ENSAOCP00000004552	ing3	ENSAOCP00000004552	ENSAOCP00000024792	Uncharacterized protein.	Inhibitor of growth protein.	0.982
ENSAOCP00000004552	meaf6	ENSAOCP00000004552	ENSAOCP00000017035	Uncharacterized protein.	MYST/Esa1-associated factor 6.	0.979
ENSAOCP00000004552	mrgbp	ENSAOCP00000004552	ENSAOCP00000002557	Uncharacterized protein.	MRG/MORF4L binding protein.	0.983
ENSAOCP00000004552	ruvbl1	ENSAOCP00000004552	ENSAOCP00000022842	Uncharacterized protein.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.959
ENSAOCP00000004552	ruvbl2	ENSAOCP00000004552	ENSAOCP00000020747	Uncharacterized protein.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.961
ENSAOCP00000004552	vps72	ENSAOCP00000004552	ENSAOCP00000012970	Uncharacterized protein.	Vacuolar protein sorting 72 homolog a.	0.965
ENSAOCP00000004552	yeats4	ENSAOCP00000004552	ENSAOCP00000018919	Uncharacterized protein.	YEATS domain containing 4.	0.969