Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111586342Uncharacterized protein. (393 aa)    
Predicted Functional Partners:
tradd
Tnfrsf1a-associated via death domain.
    
 0.999
fadd
Uncharacterized protein.
   
 0.999
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.994
nsmaf
Neutral sphingomyelinase (N-SMase) activation associated factor.
    
 0.994
LOC111580152
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.991
LOC111580650
Baculoviral IAP repeat containing 2.
    
 0.991
LOC111584314
Tnf receptor-associated factor 2b.
    
 0.991
LOC111568017
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.991
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
    
 0.988
LOC111568702
SHANK-associated RH domain interacting protein.
    
 0.985
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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