Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111572846Uncharacterized protein. (343 aa)    
Predicted Functional Partners:
LOC111574776
Laminin, gamma 3.
   
 0.961
ENSAOCP00000009093
Laminin, gamma 2.
   
 0.961
ENSAOCP00000009333
Uncharacterized protein.
   
 0.961
ENSAOCP00000025555
Uncharacterized protein.
   
 0.961
lamc1
Laminin, gamma 1.
   
 0.961
ENSAOCP00000023550
Laminin, alpha 1.
    
 0.919
ENSAOCP00000002771
Uncharacterized protein.
   
 0.889
ENSAOCP00000002880
Laminin_I domain-containing protein.
   
 0.889
Lama2
Uncharacterized protein.
   
 0.889
ENSAOCP00000013413
Uncharacterized protein.
   
 0.889
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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