Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111572747F-box protein 5. (445 aa)    
Predicted Functional Partners:
cdc27
Cell division cycle 27.
   
 0.961
Cdc20b
WD_REPEATS_REGION domain-containing protein.
   
 0.956
cdc20
Cell division cycle 20 homolog.
   
 0.956
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.950
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.936
fbxw11
F-box and WD repeat domain containing 11a.
    
 0.920
LOC111572639
Cysteine three histidine 1.
   
 0.913
anapc2
Anaphase promoting complex subunit 2; Belongs to the cullin family.
    
 0.910
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
     
 0.901
anapc4
Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.
     
 0.856
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (30%) [HD]