Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111586287Cryptochrome circadian regulator 2. (659 aa)    
Predicted Functional Partners:
per1
Period circadian clock 1b.
   
 0.952
timeless
Timeless circadian clock.
    
 0.869
LOC111587363
Neuronal PAS domain protein 2.
   
 0.852
LOC111571340
Aryl hydrocarbon receptor nuclear translocator-like 1a.
   
 0.806
ENSAOCP00000015250
Uncharacterized protein.
   
 0.806
fbxl15
F-box and leucine-rich repeat protein 15.
   
 0.790
CLOCK
Clock circadian regulator a.
   
 0.763
LOC111569807
Clock circadian regulator b.
   
 0.763
per3
Period circadian clock 3.
   
 0.761
LOC111578789
Period circadian clock 2.
   
 0.761
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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