STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111566578Transient receptor potential cation channel, subfamily C, member 5a. (401 aa)    
Predicted Functional Partners:
trpc1
Transient receptor potential cation channel, subfamily C, member 1; Belongs to the transient receptor (TC 1.A.4) family.
  
 
0.679
stim1
Stromal interaction molecule 1a.
    
 0.514
LOC111574878
SAM domain-containing protein.
    
 0.514
ENSAOCP00000024862
Stromal interaction molecule 2b.
    
 0.514
trpa1
Transient receptor potential cation channel, subfamily A, member 1b; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.504
trpm2
Transient receptor potential cation channel, subfamily M, member 2.
    
 0.463
LOC111575776
Proenkephalin a.
      
 0.420
LOC111566088
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.412
LOC111582363
Calmodulin.
    
 0.412
calm1
Calmodulin 1.
    
 0.412
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.