Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc1a4Solute carrier family 1 member 4. (528 aa)    
Predicted Functional Partners:
slc7a5
Solute carrier family 7 member 5.
   
 
 0.742
nudcd1
NudC domain containing 1.
    
   0.619
slc38a9
Solute carrier family 38 member 9.
      
 0.612
Rhoh
Ras homolog family member H.
    
 0.591
rhoq
Ras homolog family member Q.
    
 0.591
slc16a10
Solute carrier family 16 member 10.
      
 0.584
dbt
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.582
slc3a1
Solute carrier family 3 member 1.
   
 
 0.577
LOC111586806
Uncharacterized protein.
     
 0.574
mtr
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.574
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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