scaf4 protein (Amphiprion ocellaris) - STRING interaction network

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Score

scaf4

SR-related CTD-associated factor 4a. (1116 aa)

Predicted Functional Partners:

exosc10

0.818

drosha

0.767

ncbp2

0.765

LOC111577181

0.753

ENSAOCP00000008554

0.753

NCBP1

0.748

polr2b

0.732

pcf11

0.718

scaf11

0.718

mtrex

0.697

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000008554	NCBP1	ENSAOCP00000008554	ENSAOCP00000016198	Uncharacterized protein.	Nuclear cap binding protein subunit 1.	0.684
ENSAOCP00000008554	exosc10	ENSAOCP00000008554	ENSAOCP00000028858	Uncharacterized protein.	Exosome component 10.	0.718
ENSAOCP00000008554	ncbp2	ENSAOCP00000008554	ENSAOCP00000028162	Uncharacterized protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.690
ENSAOCP00000008554	pcf11	ENSAOCP00000008554	ENSAOCP00000008300	Uncharacterized protein.	PCF11 cleavage and polyadenylation factor subunit.	0.945
ENSAOCP00000008554	polr2b	ENSAOCP00000008554	ENSAOCP00000021156	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.965
ENSAOCP00000008554	scaf4	ENSAOCP00000008554	ENSAOCP00000006402	Uncharacterized protein.	SR-related CTD-associated factor 4a.	0.753
LOC111577181	NCBP1	ENSAOCP00000001275	ENSAOCP00000016198	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Nuclear cap binding protein subunit 1.	0.757
LOC111577181	exosc10	ENSAOCP00000001275	ENSAOCP00000028858	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Exosome component 10.	0.718
LOC111577181	ncbp2	ENSAOCP00000001275	ENSAOCP00000028162	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.775
LOC111577181	pcf11	ENSAOCP00000001275	ENSAOCP00000008300	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	PCF11 cleavage and polyadenylation factor subunit.	0.964
LOC111577181	polr2b	ENSAOCP00000001275	ENSAOCP00000021156	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
LOC111577181	scaf4	ENSAOCP00000001275	ENSAOCP00000006402	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	SR-related CTD-associated factor 4a.	0.753
NCBP1	ENSAOCP00000008554	ENSAOCP00000016198	ENSAOCP00000008554	Nuclear cap binding protein subunit 1.	Uncharacterized protein.	0.684
NCBP1	LOC111577181	ENSAOCP00000016198	ENSAOCP00000001275	Nuclear cap binding protein subunit 1.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.757
NCBP1	exosc10	ENSAOCP00000016198	ENSAOCP00000028858	Nuclear cap binding protein subunit 1.	Exosome component 10.	0.840
NCBP1	mtrex	ENSAOCP00000016198	ENSAOCP00000007966	Nuclear cap binding protein subunit 1.	Mtr4 exosome RNA helicase.	0.981
NCBP1	ncbp2	ENSAOCP00000016198	ENSAOCP00000028162	Nuclear cap binding protein subunit 1.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.999
NCBP1	pcf11	ENSAOCP00000016198	ENSAOCP00000008300	Nuclear cap binding protein subunit 1.	PCF11 cleavage and polyadenylation factor subunit.	0.937
NCBP1	polr2b	ENSAOCP00000016198	ENSAOCP00000021156	Nuclear cap binding protein subunit 1.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.892
NCBP1	scaf4	ENSAOCP00000016198	ENSAOCP00000006402	Nuclear cap binding protein subunit 1.	SR-related CTD-associated factor 4a.	0.748