scaf4 protein (Amphiprion ocellaris) - STRING interaction network

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Score

scaf4

SR-related CTD-associated factor 4a. (1116 aa)

Predicted Functional Partners:

LOC111577181

0.722

ENSAOCP00000008554

0.722

rnmt

0.703

ncbp2

0.682

exosc10

0.631

NCBP1

0.620

polr2b

0.585

pcf11

0.581

LOC111573426

0.540

tent4b

0.540

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000008554	NCBP1	ENSAOCP00000008554	ENSAOCP00000016198	Uncharacterized protein.	Nuclear cap binding protein subunit 1.	0.661
ENSAOCP00000008554	exosc10	ENSAOCP00000008554	ENSAOCP00000028858	Uncharacterized protein.	Exosome component 10.	0.425
ENSAOCP00000008554	ncbp2	ENSAOCP00000008554	ENSAOCP00000028162	Uncharacterized protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.680
ENSAOCP00000008554	pcf11	ENSAOCP00000008554	ENSAOCP00000008300	Uncharacterized protein.	PCF11 cleavage and polyadenylation factor subunit.	0.902
ENSAOCP00000008554	polr2b	ENSAOCP00000008554	ENSAOCP00000021156	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.983
ENSAOCP00000008554	rnmt	ENSAOCP00000008554	ENSAOCP00000012553	Uncharacterized protein.	mRNA cap guanine-N7 methyltransferase.	0.742
ENSAOCP00000008554	scaf4	ENSAOCP00000008554	ENSAOCP00000006402	Uncharacterized protein.	SR-related CTD-associated factor 4a.	0.722
LOC111573426	exosc10	ENSAOCP00000009392	ENSAOCP00000028858	Uncharacterized protein.	Exosome component 10.	0.724
LOC111573426	scaf4	ENSAOCP00000009392	ENSAOCP00000006402	Uncharacterized protein.	SR-related CTD-associated factor 4a.	0.540
LOC111573426	tent4b	ENSAOCP00000009392	ENSAOCP00000028475	Uncharacterized protein.	Terminal nucleotidyltransferase 4B.	0.902
LOC111577181	NCBP1	ENSAOCP00000001275	ENSAOCP00000016198	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Nuclear cap binding protein subunit 1.	0.696
LOC111577181	exosc10	ENSAOCP00000001275	ENSAOCP00000028858	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Exosome component 10.	0.425
LOC111577181	ncbp2	ENSAOCP00000001275	ENSAOCP00000028162	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.731
LOC111577181	pcf11	ENSAOCP00000001275	ENSAOCP00000008300	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	PCF11 cleavage and polyadenylation factor subunit.	0.913
LOC111577181	polr2b	ENSAOCP00000001275	ENSAOCP00000021156	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
LOC111577181	rnmt	ENSAOCP00000001275	ENSAOCP00000012553	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	mRNA cap guanine-N7 methyltransferase.	0.782
LOC111577181	scaf4	ENSAOCP00000001275	ENSAOCP00000006402	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	SR-related CTD-associated factor 4a.	0.722
NCBP1	ENSAOCP00000008554	ENSAOCP00000016198	ENSAOCP00000008554	Nuclear cap binding protein subunit 1.	Uncharacterized protein.	0.661
NCBP1	LOC111577181	ENSAOCP00000016198	ENSAOCP00000001275	Nuclear cap binding protein subunit 1.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.696
NCBP1	exosc10	ENSAOCP00000016198	ENSAOCP00000028858	Nuclear cap binding protein subunit 1.	Exosome component 10.	0.610