STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111574276Si:ch211-195d17.2. (388 aa)    
Predicted Functional Partners:
LOC111574410
L3MBTL histone methyl-lysine binding protein 2.
    
 0.901
LOC111582971
Transcription factor.
   
 0.888
tfdp1
Transcription factor.
   
 0.888
rnf2
Ring finger protein 2.
    
 0.875
RING1
Ring finger protein 1.
    
 0.875
pcgf6
Polycomb group ring finger 6.
    
 0.874
pcgf1
Polycomb group ring finger 1.
    
 0.874
rybp
RING1 and YY1 binding protein b.
   
 0.856
LOC111584890
FCS-type domain-containing protein.
    
 0.846
LOC111581019
Mbt domain containing 1.
    
 0.846
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.