Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
otosOtospiralin. (89 aa)    
Predicted Functional Partners:
ENSAOCP00000001925
Si:ch73-23l24.1.
      
 0.948
LOC111575220
Uncharacterized protein; Belongs to the beta/gamma-crystallin family.
      
 0.690
LOC111565552
Sterile alpha motif domain containing 7.
   
  
 0.621
Cops9
COP9 signalosome subunit 9.
      
 0.615
skil
SKI-like proto-oncogene a.
   
  
 0.598
sec62
SEC62 homolog, preprotein translocation factor.
      
 0.595
tecta
Tectorin alpha.
      
 0.552
ldlrad2
Low density lipoprotein receptor class A domain containing 2.
   
    0.552
cunh17orf67
Si:dkey-31g6.6.
      
 0.548
LOC111565528
NAD kinase b.
      
 0.492
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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