LOC111568943 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111568943	chtf18	ENSAOCP00000006508	ENSAOCP00000006885	ATPase family AAA domain containing 5a.	AAA domain-containing protein.	0.932
LOC111568943	dscc1	ENSAOCP00000006508	ENSAOCP00000018679	ATPase family AAA domain containing 5a.	DNA replication and sister chromatid cohesion 1.	0.922
LOC111568943	pcna	ENSAOCP00000006508	ENSAOCP00000002571	ATPase family AAA domain containing 5a.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.956
LOC111568943	rad17	ENSAOCP00000006508	ENSAOCP00000014645	ATPase family AAA domain containing 5a.	RAD17 checkpoint clamp loader component.	0.916
LOC111568943	recql4	ENSAOCP00000006508	ENSAOCP00000001298	ATPase family AAA domain containing 5a.	RecQ helicase-like 4.	0.917
LOC111568943	rfc2	ENSAOCP00000006508	ENSAOCP00000003383	ATPase family AAA domain containing 5a.	Replication factor C (activator 1) 2.	0.958
LOC111568943	rfc3	ENSAOCP00000006508	ENSAOCP00000005015	ATPase family AAA domain containing 5a.	Replication factor C (activator 1) 3.	0.960
LOC111568943	rfc4	ENSAOCP00000006508	ENSAOCP00000016741	ATPase family AAA domain containing 5a.	Replication factor C (activator 1) 4.	0.979
LOC111568943	rfc5	ENSAOCP00000006508	ENSAOCP00000005475	ATPase family AAA domain containing 5a.	Replication factor C (activator 1) 5.	0.978
LOC111568943	wdhd1	ENSAOCP00000006508	ENSAOCP00000013569	ATPase family AAA domain containing 5a.	WD repeat and HMG-box DNA binding protein 1.	0.936
chtf18	LOC111568943	ENSAOCP00000006885	ENSAOCP00000006508	AAA domain-containing protein.	ATPase family AAA domain containing 5a.	0.932
chtf18	dscc1	ENSAOCP00000006885	ENSAOCP00000018679	AAA domain-containing protein.	DNA replication and sister chromatid cohesion 1.	0.999
chtf18	pcna	ENSAOCP00000006885	ENSAOCP00000002571	AAA domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.993
chtf18	rad17	ENSAOCP00000006885	ENSAOCP00000014645	AAA domain-containing protein.	RAD17 checkpoint clamp loader component.	0.956
chtf18	recql4	ENSAOCP00000006885	ENSAOCP00000001298	AAA domain-containing protein.	RecQ helicase-like 4.	0.943
chtf18	rfc2	ENSAOCP00000006885	ENSAOCP00000003383	AAA domain-containing protein.	Replication factor C (activator 1) 2.	0.991
chtf18	rfc3	ENSAOCP00000006885	ENSAOCP00000005015	AAA domain-containing protein.	Replication factor C (activator 1) 3.	0.991
chtf18	rfc4	ENSAOCP00000006885	ENSAOCP00000016741	AAA domain-containing protein.	Replication factor C (activator 1) 4.	0.997
chtf18	rfc5	ENSAOCP00000006885	ENSAOCP00000005475	AAA domain-containing protein.	Replication factor C (activator 1) 5.	0.994
chtf18	wdhd1	ENSAOCP00000006885	ENSAOCP00000013569	AAA domain-containing protein.	WD repeat and HMG-box DNA binding protein 1.	0.984