STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf407Zinc finger protein 407. (645 aa)    
Predicted Functional Partners:
znf236
Zinc finger protein 236.
   
  
0.636
LOC111563778
ADNP homeobox 2b.
   
 
 0.556
eral1
Era-like 12S mitochondrial rRNA chaperone 1.
    
 0.517
wdr75
WD repeat domain 75.
      
 0.511
txnl4a
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
      
 0.491
ctdp1
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
    
 
 0.453
LOC111571535
Si:dkey-24p1.6.
      
 0.432
ENSAOCP00000031216
Uncharacterized protein.
      
 0.432
terb1
Telomere repeat binding bouquet formation protein 1.
      
 0.416
LOC111583893
Uncharacterized protein.
      
 0.416
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.