LOC111567711 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111567711	LOC111569424	ENSAOCP00000006531	ENSAOCP00000023697	Ring finger protein 146.	Poly [ADP-ribose] polymerase.	0.898
LOC111567711	LOC111582272	ENSAOCP00000006531	ENSAOCP00000026822	Ring finger protein 146.	Poly [ADP-ribose] polymerase.	0.898
LOC111567711	chd1l	ENSAOCP00000006531	ENSAOCP00000010234	Ring finger protein 146.	Chromodomain helicase DNA binding protein 1-like.	0.857
LOC111567711	lig3	ENSAOCP00000006531	ENSAOCP00000018843	Ring finger protein 146.	DNA ligase.	0.865
LOC111567711	parp1	ENSAOCP00000006531	ENSAOCP00000030156	Ring finger protein 146.	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.	0.902
LOC111567711	parp2	ENSAOCP00000006531	ENSAOCP00000004082	Ring finger protein 146.	Poly [ADP-ribose] polymerase.	0.897
LOC111567711	ssrp1	ENSAOCP00000006531	ENSAOCP00000007170	Ring finger protein 146.	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	0.844
LOC111567711	supt16h	ENSAOCP00000006531	ENSAOCP00000021249	Ring finger protein 146.	SPT16 homolog, facilitates chromatin remodeling subunit.	0.848
LOC111567711	xpc	ENSAOCP00000006531	ENSAOCP00000023226	Ring finger protein 146.	Xeroderma pigmentosum, complementation group C.	0.837
LOC111567711	xrcc1	ENSAOCP00000006531	ENSAOCP00000006034	Ring finger protein 146.	X-ray repair complementing defective repair in Chinese hamster cells 1.	0.875
LOC111569424	LOC111567711	ENSAOCP00000023697	ENSAOCP00000006531	Poly [ADP-ribose] polymerase.	Ring finger protein 146.	0.898
LOC111569424	chd1l	ENSAOCP00000023697	ENSAOCP00000010234	Poly [ADP-ribose] polymerase.	Chromodomain helicase DNA binding protein 1-like.	0.603
LOC111569424	parp1	ENSAOCP00000023697	ENSAOCP00000030156	Poly [ADP-ribose] polymerase.	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.	0.469
LOC111569424	parp2	ENSAOCP00000023697	ENSAOCP00000004082	Poly [ADP-ribose] polymerase.	Poly [ADP-ribose] polymerase.	0.512
LOC111569424	ssrp1	ENSAOCP00000023697	ENSAOCP00000007170	Poly [ADP-ribose] polymerase.	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	0.666
LOC111582272	LOC111567711	ENSAOCP00000026822	ENSAOCP00000006531	Poly [ADP-ribose] polymerase.	Ring finger protein 146.	0.898
LOC111582272	chd1l	ENSAOCP00000026822	ENSAOCP00000010234	Poly [ADP-ribose] polymerase.	Chromodomain helicase DNA binding protein 1-like.	0.603
LOC111582272	parp1	ENSAOCP00000026822	ENSAOCP00000030156	Poly [ADP-ribose] polymerase.	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.	0.469
LOC111582272	parp2	ENSAOCP00000026822	ENSAOCP00000004082	Poly [ADP-ribose] polymerase.	Poly [ADP-ribose] polymerase.	0.578
LOC111582272	ssrp1	ENSAOCP00000026822	ENSAOCP00000007170	Poly [ADP-ribose] polymerase.	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	0.666