Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111570578PB1 domain-containing protein. (105 aa)    
Predicted Functional Partners:
prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.985
LOC111572559
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.985
CDC42
Cell division cycle 42.
    
 0.978
LOC111573839
Uncharacterized protein.
    
 0.978
LOC111566680
PDZ domain-containing protein.
 
 
  0.966
LOC111585700
Cell division cycle 42, like.
    
 0.957
LOC111571068
Uncharacterized protein.
    
 0.957
MPP5
Membrane palmitoylated protein 5; Belongs to the MAGUK family.
   
 0.951
LOC111564613
Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family.
   
 0.951
LOC111574264
Par-6 family cell polarity regulator gamma b.
  
  
 
0.908
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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