Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000006534Synapsin_C domain-containing protein. (170 aa)    
Predicted Functional Partners:
SYN3
Uncharacterized protein.
 
     0.923
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.659
ENSAOCP00000012448
PDZ domain-containing protein.
   
 
 0.659
ENSAOCP00000012478
C2 domain-containing protein.
   
 
 0.659
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.656
LOC111587406
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.656
LOC111572069
Synaptotagmin IIa.
   
 0.589
LOC111570883
Synaptotagmin Ia.
   
 0.589
LOC111584615
Synaptotagmin Vb.
   
 0.589
LOC111571933
Synaptotagmin Ib.
   
 0.589
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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