Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111575330Coiled-coil domain containing 149b. (340 aa)    
Predicted Functional Partners:
ccdc96
Coiled-coil domain containing 96.
      
 0.615
LOC111580060
Solute carrier family 36 member 1.
      
 0.612
zbtb49
Zinc finger and BTB domain containing 49.
      
 0.601
sepsecs
O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis.
      
 0.543
ccdc113
Coiled-coil domain containing 113.
      
 0.533
ENSAOCP00000029351
Protein kinase domain-containing protein.
      
 0.532
adgb
Androglobin; Belongs to the peptidase C2 family.
      
 0.513
bicdl1
BICD family like cargo adaptor 1.
      
 0.510
zcchc4
Zinc finger, CCHC domain containing 4.
      
 0.503
LOC111564529
Zgc:153738.
      
 0.490
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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