Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tmem241Transmembrane protein 241. (193 aa)    
Predicted Functional Partners:
ankrd29
Ankyrin repeat domain 29.
      
 0.705
slc35e4
Solute carrier family 35 member E4.
      
 0.705
riok2
RIO kinase 2 (yeast).
      
 0.705
mysm1
Myb-like, SWIRM and MPN domains 1.
   
 
 0.698
tmem234
Transmembrane protein 234.
      
 0.696
thoc1
THO complex 1.
      
 0.679
mllt11
MLLT11 transcription factor 7 cofactor.
      
 0.617
MRPL21
Mitochondrial ribosomal protein L21.
      
 0.615
cdh22
Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.612
ZNF521
Zinc finger protein 521.
      
 0.494
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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