lmbrd1 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

lmbrd1

LMBR1 domain containing 1. (538 aa)

Predicted Functional Partners:

abcd4

0.967

abcd3

0.763

abcd2

0.657

ENSAOCP00000011434

0.657

LOC111568631

0.657

mmaa

0.646

mmachc

0.621

mmab

0.601

mtrr

0.597

mmut

0.592

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000011434	LOC111568631	ENSAOCP00000011434	ENSAOCP00000032258	ABC transmembrane type-1 domain-containing protein.	ATP-binding cassette, sub-family D (ALD), member 1.	0.900
ENSAOCP00000011434	abcd3	ENSAOCP00000011434	ENSAOCP00000010829	ABC transmembrane type-1 domain-containing protein.	ATP-binding cassette, sub-family D (ALD), member 3a.	0.753
ENSAOCP00000011434	abcd4	ENSAOCP00000011434	ENSAOCP00000003397	ABC transmembrane type-1 domain-containing protein.	ATP-binding cassette, sub-family D (ALD), member 4.	0.650
ENSAOCP00000011434	lmbrd1	ENSAOCP00000011434	ENSAOCP00000006575	ABC transmembrane type-1 domain-containing protein.	LMBR1 domain containing 1.	0.657
LOC111568631	ENSAOCP00000011434	ENSAOCP00000032258	ENSAOCP00000011434	ATP-binding cassette, sub-family D (ALD), member 1.	ABC transmembrane type-1 domain-containing protein.	0.900
LOC111568631	abcd3	ENSAOCP00000032258	ENSAOCP00000010829	ATP-binding cassette, sub-family D (ALD), member 1.	ATP-binding cassette, sub-family D (ALD), member 3a.	0.742
LOC111568631	abcd4	ENSAOCP00000032258	ENSAOCP00000003397	ATP-binding cassette, sub-family D (ALD), member 1.	ATP-binding cassette, sub-family D (ALD), member 4.	0.650
LOC111568631	lmbrd1	ENSAOCP00000032258	ENSAOCP00000006575	ATP-binding cassette, sub-family D (ALD), member 1.	LMBR1 domain containing 1.	0.657
abcd2	abcd3	ENSAOCP00000004934	ENSAOCP00000010829	ATP-binding cassette, sub-family D (ALD), member 2.	ATP-binding cassette, sub-family D (ALD), member 3a.	0.742
abcd2	abcd4	ENSAOCP00000004934	ENSAOCP00000003397	ATP-binding cassette, sub-family D (ALD), member 2.	ATP-binding cassette, sub-family D (ALD), member 4.	0.650
abcd2	lmbrd1	ENSAOCP00000004934	ENSAOCP00000006575	ATP-binding cassette, sub-family D (ALD), member 2.	LMBR1 domain containing 1.	0.657
abcd3	ENSAOCP00000011434	ENSAOCP00000010829	ENSAOCP00000011434	ATP-binding cassette, sub-family D (ALD), member 3a.	ABC transmembrane type-1 domain-containing protein.	0.753
abcd3	LOC111568631	ENSAOCP00000010829	ENSAOCP00000032258	ATP-binding cassette, sub-family D (ALD), member 3a.	ATP-binding cassette, sub-family D (ALD), member 1.	0.742
abcd3	abcd2	ENSAOCP00000010829	ENSAOCP00000004934	ATP-binding cassette, sub-family D (ALD), member 3a.	ATP-binding cassette, sub-family D (ALD), member 2.	0.742
abcd3	lmbrd1	ENSAOCP00000010829	ENSAOCP00000006575	ATP-binding cassette, sub-family D (ALD), member 3a.	LMBR1 domain containing 1.	0.763
abcd3	mmut	ENSAOCP00000010829	ENSAOCP00000022762	ATP-binding cassette, sub-family D (ALD), member 3a.	Methylmalonyl CoA mutase.	0.512
abcd4	ENSAOCP00000011434	ENSAOCP00000003397	ENSAOCP00000011434	ATP-binding cassette, sub-family D (ALD), member 4.	ABC transmembrane type-1 domain-containing protein.	0.650
abcd4	LOC111568631	ENSAOCP00000003397	ENSAOCP00000032258	ATP-binding cassette, sub-family D (ALD), member 4.	ATP-binding cassette, sub-family D (ALD), member 1.	0.650
abcd4	abcd2	ENSAOCP00000003397	ENSAOCP00000004934	ATP-binding cassette, sub-family D (ALD), member 4.	ATP-binding cassette, sub-family D (ALD), member 2.	0.650
abcd4	lmbrd1	ENSAOCP00000003397	ENSAOCP00000006575	ATP-binding cassette, sub-family D (ALD), member 4.	LMBR1 domain containing 1.	0.967