Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC111574263Methylphosphate capping enzyme. (688 aa)    
Predicted Functional Partners:
larp7
La ribonucleoprotein domain family, member 7.
   
 
 0.948
cdk9
Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.
    
 
 0.931
sart3
Spliceosome associated factor 3, U4/U6 recycling protein.
    
 
 0.916
LOC111574240
HEXIM P-TEFb complex subunit 1.
    
 
 0.896
prpf3
PRP3 pre-mRNA processing factor 3 homolog (yeast).
    
   0.835
prpf4
PRP4 pre-mRNA processing factor 4 homolog (yeast).
   
   0.834
prpf31
PRP31 pre-mRNA processing factor 31 homolog (yeast).
    
   0.831
Snrpf
Small nuclear ribonucleoprotein polypeptide F.
    
   0.820
snrpb
Small nuclear ribonucleoprotein-associated protein.
    
 
 0.814
lsm5
U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.
    
   0.805
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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