STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
strn3Striatin, calmodulin binding protein 3. (710 aa)    
Predicted Functional Partners:
strip2
Striatin interacting protein 2.
    
 
 0.778
strip1
Striatin interacting protein 1.
    
 
 0.745
LOC111587249
Protein phosphatase 2, regulatory subunit A, beta b.
   
 
 0.738
LOC111583822
MOB family member 4, phocein.
   
 
 0.734
fgfr1op2
FGFR1 oncogene partner 2.
    
 
 0.723
LOC111572487
CTTNBP2 N-terminal like a.
   
 
 0.675
LOC111574385
CTTNBP2 N-terminal like b.
   
 
 0.675
sike1
Suppressor of IKBKE 1.
    
 
 0.641
slmap
Sarcolemma associated protein a.
    
 0.641
LOC111567715
Programmed cell death 10b.
    
 
 0.606
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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