ppfibp1 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000016161	LOC111572487	ENSAOCP00000016161	ENSAOCP00000006739	Cyclin D2, a; Belongs to the cyclin family.	CTTNBP2 N-terminal like a.	0.556
ENSAOCP00000016161	LOC111574390	ENSAOCP00000016161	ENSAOCP00000016850	Cyclin D2, a; Belongs to the cyclin family.	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.590
ENSAOCP00000016161	LOC111583222	ENSAOCP00000016161	ENSAOCP00000024894	Cyclin D2, a; Belongs to the cyclin family.	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.590
ENSAOCP00000016161	ppfibp1	ENSAOCP00000016161	ENSAOCP00000006792	Cyclin D2, a; Belongs to the cyclin family.	PPFIA binding protein 1b.	0.512
LOC111570914	LOC111572106	ENSAOCP00000030766	ENSAOCP00000024843	BTB (POZ) domain containing 11b.	TP53 induced glycolysis regulatory phosphatase a.	0.477
LOC111570914	LOC111574385	ENSAOCP00000030766	ENSAOCP00000016901	BTB (POZ) domain containing 11b.	CTTNBP2 N-terminal like b.	0.406
LOC111570914	ppfibp1	ENSAOCP00000030766	ENSAOCP00000006792	BTB (POZ) domain containing 11b.	PPFIA binding protein 1b.	0.420
LOC111572106	LOC111570914	ENSAOCP00000024843	ENSAOCP00000030766	TP53 induced glycolysis regulatory phosphatase a.	BTB (POZ) domain containing 11b.	0.477
LOC111572106	LOC111574385	ENSAOCP00000024843	ENSAOCP00000016901	TP53 induced glycolysis regulatory phosphatase a.	CTTNBP2 N-terminal like b.	0.549
LOC111572106	LOC111574390	ENSAOCP00000024843	ENSAOCP00000016850	TP53 induced glycolysis regulatory phosphatase a.	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.401
LOC111572106	LOC111583222	ENSAOCP00000024843	ENSAOCP00000024894	TP53 induced glycolysis regulatory phosphatase a.	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.401
LOC111572106	ppfibp1	ENSAOCP00000024843	ENSAOCP00000006792	TP53 induced glycolysis regulatory phosphatase a.	PPFIA binding protein 1b.	0.419
LOC111572487	ENSAOCP00000016161	ENSAOCP00000006739	ENSAOCP00000016161	CTTNBP2 N-terminal like a.	Cyclin D2, a; Belongs to the cyclin family.	0.556
LOC111572487	LOC111574390	ENSAOCP00000006739	ENSAOCP00000016850	CTTNBP2 N-terminal like a.	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.553
LOC111572487	LOC111583222	ENSAOCP00000006739	ENSAOCP00000024894	CTTNBP2 N-terminal like a.	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.553
LOC111572487	ccnd2	ENSAOCP00000006739	ENSAOCP00000030329	CTTNBP2 N-terminal like a.	Cyclin D2, b; Belongs to the cyclin family.	0.406
LOC111572487	ppfibp1	ENSAOCP00000006739	ENSAOCP00000006792	CTTNBP2 N-terminal like a.	PPFIA binding protein 1b.	0.466
LOC111574385	LOC111570914	ENSAOCP00000016901	ENSAOCP00000030766	CTTNBP2 N-terminal like b.	BTB (POZ) domain containing 11b.	0.406
LOC111574385	LOC111572106	ENSAOCP00000016901	ENSAOCP00000024843	CTTNBP2 N-terminal like b.	TP53 induced glycolysis regulatory phosphatase a.	0.549
LOC111574385	LOC111574390	ENSAOCP00000016901	ENSAOCP00000016850	CTTNBP2 N-terminal like b.	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.401