STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111583590Uncharacterized protein. (1035 aa)    
Predicted Functional Partners:
sh3yl1
SH3 and SYLF domain containing 1.
   
   0.587
LOC111584673
ENTH domain-containing protein.
     
 0.573
clint1
Clathrin interactor 1a.
     
 0.573
vta1
Vesicle (multivesicular body) trafficking 1.
    
   0.566
noxo1
NADPH oxidase organizer 1a.
   
 0.527
gak
Cyclin G associated kinase.
     
 0.527
LOC111588436
NADPH oxidase organizer 1b.
   
 0.527
SH3PXD2A
SH3 and PX domains 2A.
   
 0.520
LOC111583135
SH3 and PX domains 2Aa.
   
 0.520
sh3pxd2b
SH3 and PX domains 2B.
   
 0.520
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (40%) [HD]