Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RAP2BRAP2B, member of RAS oncogene family. (140 aa)    
Predicted Functional Partners:
LOC111576806
Zgc:171558.
   
 0.733
LOC111582170
Rap guanine nucleotide exchange factor (GEF) 4.
   
 0.733
rapgef2
Rap guanine nucleotide exchange factor (GEF) 2.
    
 0.729
raf1
Raf-1 proto-oncogene, serine/threonine kinase a.
    
 0.648
braf
B-Raf proto-oncogene, serine/threonine kinase.
    
 0.648
LOC111568015
A-Raf proto-oncogene, serine/threonine kinase.
    
 0.648
LOC111581117
Rap guanine nucleotide exchange factor (GEF) 3.
    
 0.601
nf1
Neurofibromin 1b.
    
 0.570
LOC111565049
Im:7152348.
    
 0.570
grb2
Growth factor receptor-bound protein 2b.
   
 0.570
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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