Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111582399Rho GTPase activating protein 17. (885 aa)    
Predicted Functional Partners:
LOC111575124
Angiomotin.
    
 0.951
CDC42
Cell division cycle 42.
   
 0.951
LOC111573839
Uncharacterized protein.
   
 0.951
RAC1
Rac family small GTPase 1.
   
 0.943
LOC111576185
Uncharacterized protein.
   
 0.943
LOC111585700
Cell division cycle 42, like.
   
 0.934
LOC111571068
Uncharacterized protein.
   
 0.934
amotl2
Angiomotin like 2a.
    
 0.910
LOC111578813
Angiomotin like 2b.
    
 0.910
LOC111577356
Rho GTPase activating protein 17b.
  
  
 
0.901
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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