Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000007066Uncharacterized protein. (56 aa)    
Predicted Functional Partners:
ENSAOCP00000003657
Uncharacterized protein.
     
0.626
LOC111565013
Uncharacterized protein.
     
 0.625
COX1
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
     
  0.429
LOC111562508
Cytochrome c oxidase subunit 7C.
     
  0.429
LOC111577159
Cytochrome c oxidase subunit 4I1.
     
 0.427
LOC111575588
Cytochrome c oxidase subunit 4I2.
     
 0.427
LOC111587615
Uncharacterized protein.
     
  0.414
LOC111587412
Cytochrome c oxidase subunit 5Ab.
     
  0.414
LOC111573088
Cytochrome c oxidase subunit 5B2.
     
  0.403
LOC111569320
Uncharacterized protein.
     
  0.403
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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