Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111572928Uncharacterized protein. (1352 aa)    
Predicted Functional Partners:
mis12
MIS12 kinetochore complex component.
     
 0.567
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.561
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
   
 0.560
ENSAOCP00000004571
Uncharacterized protein.
   
 0.558
ENSAOCP00000022539
RanBD1 domain-containing protein.
   
 0.558
ENSAOCP00000022560
Uncharacterized protein.
   
 0.558
bub3
BUB3 mitotic checkpoint protein.
   
 0.501
NEK9
NIMA related kinase 9.
   
  0.493
NEK9-2
NIMA related kinase 9.
   
  0.493
mad1l1
Mitotic arrest deficient 1 like 1.
    
 0.481
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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