STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111582411Forkhead box J1b. (591 aa)    
Predicted Functional Partners:
cunh6orf118
TSNAXIP1_N domain-containing protein.
   
    0.557
rfx2
Regulatory factor X, 2 (influences HLA class II expression).
    
 
 0.550
rfx3
Regulatory factor X, 3 (influences HLA class II expression).
    
 
 0.496
tcf7l2
Transcription factor 7 like 2.
    
 
 0.487
ENSAOCP00000020273
Uncharacterized protein.
      
 0.435
ift88
Intraflagellar transport 88 homolog.
    
 
 0.421
LOC111571889
Regulatory factor X, 1b (influences HLA class II expression).
    
 
 0.415
LOC111568938
Regulatory factor X, 1a (influences HLA class II expression).
    
 
 0.415
CCNO
Cyclin O; Belongs to the cyclin family.
    
 0.409
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.