STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111583077Uncharacterized protein. (1208 aa)    
Predicted Functional Partners:
agrn
Agrin.
    
 0.806
ldlrap1
Low density lipoprotein receptor adaptor protein 1b.
    
 0.701
dab2
DAB adaptor protein 2.
    
 0.670
ankra2
Ankyrin repeat, family A (RFXANK-like), 2.
    
 0.626
pcsk9
Proprotein convertase subtilisin/kexin type 9.
    
 0.616
LOC111575547
Dickkopf WNT signaling pathway inhibitor 1a.
    
 0.614
RELN
Reelin.
    
 0.602
MUSK
Muscle associated receptor tyrosine kinase.
   
 0.585
LOC111585014
Intersectin 2b.
    
 0.554
ENSAOCP00000012646
Uncharacterized protein.
    
 0.554
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.