STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111572507Fork-head domain-containing protein. (462 aa)    
Predicted Functional Partners:
tcf7l2
Transcription factor 7 like 2.
    
 
 0.714
LOC111564158
SRY-box transcription factor 1a.
   
 0.713
LOC111575900
Southpaw.
     
 0.704
pitx2
Homeobox protein.
    
 
 0.700
LOC111567136
LIM domain containing preferred translocation partner in lipoma.
      
 0.692
LOC111576830
SIX homeobox 7.
      
 0.692
ENSAOCP00000016935
BTB domain-containing protein.
      
 0.692
Kctd12
Potassium channel tetramerisation domain containing 12.1.
      
 0.692
cunh6orf118
TSNAXIP1_N domain-containing protein.
   
    0.557
rfx2
Regulatory factor X, 2 (influences HLA class II expression).
    
 
 0.550
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.