mrps27 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000005734	Mrps2	ENSAOCP00000005734	ENSAOCP00000004234	Mitochondrial ribosomal protein S5.	Mitochondrial ribosomal protein S2.	0.999
ENSAOCP00000005734	dap3	ENSAOCP00000005734	ENSAOCP00000013313	Mitochondrial ribosomal protein S5.	Death associated protein 3.	0.999
ENSAOCP00000005734	mrps10	ENSAOCP00000005734	ENSAOCP00000016586	Mitochondrial ribosomal protein S5.	Mitochondrial ribosomal protein S10.	0.999
ENSAOCP00000005734	mrps14	ENSAOCP00000005734	ENSAOCP00000012122	Mitochondrial ribosomal protein S5.	Mitochondrial ribosomal protein S14.	0.999
ENSAOCP00000005734	mrps15	ENSAOCP00000005734	ENSAOCP00000010647	Mitochondrial ribosomal protein S5.	Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.999
ENSAOCP00000005734	mrps16	ENSAOCP00000005734	ENSAOCP00000003506	Mitochondrial ribosomal protein S5.	Mitochondrial ribosomal protein S16.	0.999
ENSAOCP00000005734	mrps25	ENSAOCP00000005734	ENSAOCP00000012521	Mitochondrial ribosomal protein S5.	Mitochondrial ribosomal protein S25.	0.999
ENSAOCP00000005734	mrps27	ENSAOCP00000005734	ENSAOCP00000007428	Mitochondrial ribosomal protein S5.	Mitochondrial ribosomal protein S27.	0.999
ENSAOCP00000005734	mrps31	ENSAOCP00000005734	ENSAOCP00000011455	Mitochondrial ribosomal protein S5.	Mitochondrial ribosomal protein S31.	0.999
ENSAOCP00000005734	mrps9	ENSAOCP00000005734	ENSAOCP00000013216	Mitochondrial ribosomal protein S5.	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
Mrps2	ENSAOCP00000005734	ENSAOCP00000004234	ENSAOCP00000005734	Mitochondrial ribosomal protein S2.	Mitochondrial ribosomal protein S5.	0.999
Mrps2	dap3	ENSAOCP00000004234	ENSAOCP00000013313	Mitochondrial ribosomal protein S2.	Death associated protein 3.	0.999
Mrps2	mrps10	ENSAOCP00000004234	ENSAOCP00000016586	Mitochondrial ribosomal protein S2.	Mitochondrial ribosomal protein S10.	0.999
Mrps2	mrps14	ENSAOCP00000004234	ENSAOCP00000012122	Mitochondrial ribosomal protein S2.	Mitochondrial ribosomal protein S14.	0.999
Mrps2	mrps15	ENSAOCP00000004234	ENSAOCP00000010647	Mitochondrial ribosomal protein S2.	Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.999
Mrps2	mrps16	ENSAOCP00000004234	ENSAOCP00000003506	Mitochondrial ribosomal protein S2.	Mitochondrial ribosomal protein S16.	0.999
Mrps2	mrps25	ENSAOCP00000004234	ENSAOCP00000012521	Mitochondrial ribosomal protein S2.	Mitochondrial ribosomal protein S25.	0.999
Mrps2	mrps27	ENSAOCP00000004234	ENSAOCP00000007428	Mitochondrial ribosomal protein S2.	Mitochondrial ribosomal protein S27.	0.998
Mrps2	mrps31	ENSAOCP00000004234	ENSAOCP00000011455	Mitochondrial ribosomal protein S2.	Mitochondrial ribosomal protein S31.	0.997
Mrps2	mrps9	ENSAOCP00000004234	ENSAOCP00000013216	Mitochondrial ribosomal protein S2.	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999