STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sowahdSosondowah ankyrin repeat domain family d. (325 aa)    
Predicted Functional Partners:
LOC111567538
Uncharacterized protein.
      
 0.513
ENSAOCP00000002682
Transmembrane protein 119b.
    
 
 0.490
ift81
Intraflagellar transport 81 homolog.
    
 0.487
LOC111582058
Sterile alpha motif domain containing 10a.
      
 0.487
ift88
Intraflagellar transport 88 homolog.
   
 0.454
LOC111563621
Uncharacterized protein.
    
 0.452
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.449
GRTP1
Growth hormone regulated TBC protein 1b.
    
 
 0.449
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.437
arhgap45
Rho GTPase activating protein 45b.
     
 0.426
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.