Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
sowahdSosondowah ankyrin repeat domain family d. (325 aa)    
Predicted Functional Partners:
LOC111567538
Uncharacterized protein.
      
 0.642
ENSAOCP00000002682
Transmembrane protein 119b.
    
 
 0.618
LOC111582058
Sterile alpha motif domain containing 10a.
      
 0.615
arhgap45
Rho GTPase activating protein 45b.
     
 0.612
drc7
Uncharacterized protein.
    
 
 0.583
RASAL1
RAS protein activator like 1.
      
 0.542
LOC111584694
Transmembrane protein 151Bb.
      
 0.542
tmem151b
Transmembrane protein 151Ba.
      
 0.542
GRTP1
Growth hormone regulated TBC protein 1b.
    
 
 0.541
LOC111580182
Myosin IF; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.535
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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