STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pkn1Protein kinase N1a. (953 aa)    
Predicted Functional Partners:
LOC111587485
Uncharacterized protein.
   
 0.955
LOC111568127
Uncharacterized protein.
   
 0.955
LOC111573843
Uncharacterized protein.
   
 0.955
LOC111580849
Uncharacterized protein.
   
 0.955
pkn2
Protein kinase N2.
  
  
 
0.906
LOC111584665
Uncharacterized protein.
  
  
 
0.901
pdpk1
3-phosphoinositide dependent protein kinase 1b.
    
0.751
CDC25B
Cell division cycle 25B.
    
 0.584
rnd3
Rho family GTPase 3a.
   
 0.576
LOC111580690
Uncharacterized protein.
   
 0.576
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.